PHATRDRAFT_38931 paf1 rna polymerase ii complexhomolog (Plus-3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_38931 chr_17 paf1 rna polymerase ii complexhomolog (Plus-3) 579206 582580 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0008

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Plus-3 Plus-3 domain; This domain is about 90 residues in length and is often found associated with the... cl02186 102.725 2.17E-25 634 - 744 specific 251744
Plus-3 superfamily Plus-3 domain; This domain is about 90 residues in length and is often found associated with the... - 102.725 2.17E-25 634 - 744 superfamily 261212
COG5296 Transcription factor involved in TATA site selection and in elongation by RNA polymerase II [... - 86.6337 7.97E-18 404 - 865 multi-dom 227615

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23469 Not available 233058 Not available 222940 Not available AT1G61040.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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