PHATRDRAFT_39727 at4g32140 f10n7_50 (RhaT)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39727	chr_20	at4g32140 f10n7_50 (RhaT)	554516	555751	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0248

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0002	0.43	470 780

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EamA		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	cl17759	40.3043	0.000111382	140 - 222	specific	250209
EamA superfamily		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	-	40.3043	0.000111382	140 - 222	superfamily	266818
RhaT		Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and...	-	56.7985	2.67E-09	142 - 381	multi-dom	223769

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre07.g353850.t1.2	AT4G32140.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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