PHATRDRAFT_40783 hemolysin-related protein (TlyC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_40783 chr_25 hemolysin-related protein (TlyC) 386319 388405 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0073
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains... cl15354 99.102 1.68E-24 234 - 452 specific 239963
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 99.102 1.68E-24 234 - 452 superfamily 265675
DUF21 superfamily Domain of unknown function DUF21; This transmembrane region has no known function. Many of the... - 106.118 3.80E-26 30 - 211 superfamily 250731
DUF21 superfamily Domain of unknown function DUF21; This transmembrane region has no known function. Many of the... - 106.118 3.80E-26 30 - 211 superfamily 250731
CorC_HlyC Transporter associated domain; This small domain is found in a family of proteins with the DUF21... cl08393 68.6211 3.51E-14 476 - 555 specific 215020
CorC_HlyC superfamily Transporter associated domain; This small domain is found in a family of proteins with the... - 68.6211 3.51E-14 476 - 555 superfamily 263626
TlyC Hemolysins and related proteins containing CBS domains [General function prediction only] - 249.136 5.70E-75 29 - 555 multi-dom 224173

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23908 Not available 158419 226235 464911 Not available AT1G55930.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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