PHATRDRAFT_40942 cgi-122 protein (GINS_A_psf2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40942	chr_26	cgi-122 protein (GINS_A_psf2)	327426	328133	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0257

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0006	0.56	780 24000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GINS_A_psf2		Alpha-helical domain of GINS complex protein Psf2 (partner of Sld5 2); Psf2 is a component of GINS...	cl17012	94.5987	1.68E-24	69 - 198	specific	212550
GINS_A superfamily		Alpha-helical domain of GINS complex proteins; Sld5, Psf1, Psf2 and Psf3; The GINS complex is...	-	94.5987	1.68E-24	69 - 198	superfamily	266497

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24126		Not available	238177	116440	Not available	Not available	AT3G12530.1	328060

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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