PHATRDRAFT_42051 gene product (PLN02850)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42051 chr_11 gene product (PLN02850) 168869 170608 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0148

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0235
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain. Assignment to class II aminoacyl-tRNA... cl00268 450.094 6.41E-155 255 - 575 specific 238399
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 450.094 6.41E-155 255 - 575 superfamily 260313
AspRS_cyto_N AspRS_cyto_N: N-terminal, anticodon recognition domain of the type found in Saccharomyces... cl19106 118.435 1.05E-31 117 - 219 specific 239815
Asp_Lys_Asn_RS_N superfamily Asp_Lys_Asn_RS_N: N-terminal, anticodon recognition domain of class 2b aminoacyl-tRNA synthetases (... - 118.435 1.05E-31 117 - 219 superfamily 267459
PLN02850 aspartate-tRNA ligase - 907.93 0 74 - 579 multi-dom 215456

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268068 Not available 225445 238299 415539 Not available AT4G26870.1 345169

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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