PHATRDRAFT_42946 (Got1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42946	chr_1	(Got1)	1599941	1600616	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0097

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0168	0.27	11 80000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Got1		Got1/Sft2-like family; Traffic through the yeast Golgi complex depends on a member of the syntaxin...	cl02130	71.4226	2.48E-16	57 - 175	specific	252427
Got1 superfamily		Got1/Sft2-like family; Traffic through the yeast Golgi complex depends on a member of the syntaxin...	-	71.4226	2.48E-16	57 - 175	superfamily	261191

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	210094	171226	451257	Cre12.g549950.t1.2	AT5G23550.1	255591

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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