PHATRDRAFT_43037 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43037	chr_1		1868419	1871959	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0254	0.23	40000 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ApoLp-III_like superfamily		Apolipophorin-III and similar insect proteins; Exchangeable apolipoproteins play vital roles in the...	-	46.2075	1.78E-05	773 - 942	superfamily	267466
HC2 superfamily		Histone H1-like nucleoprotein HC2; This family contains the bacterial histone H1-like nucleoprotein...	-	40.5323	0.000790782	975 - 1050	superfamily	267651
Rab5-bind		Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for...	-	37.7568	0.00626032	749 - 923	multi-dom	255279

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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