PHATRDRAFT_43174 gdp-fucose transporter (VRG4)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43174	chr_1	gdp-fucose transporter (VRG4)	2231553	2232656	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0124

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0241	0.23	26 73000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPT superfamily		Triose-phosphate Transporter family; This family includes transporters with a specificity for...	-	45.6241	2.31E-06	186 - 326	superfamily	251760
VRG4		Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational...	-	49.5012	5.21E-07	15 - 340	multi-dom	227402

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38157		Not available	186356	183038	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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