PHATRDRAFT_43202 vesicle protein sorting-associated (Sec1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43202	chr_1	vesicle protein sorting-associated (Sec1)	2300918	2302953	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0182

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sec1		Sec1 family; Sec1 family.	cl15415	399.314	6.52E-131	44 - 644	specific	250279
Sec1 superfamily		Sec1 family; Sec1 family.	-	399.314	6.52E-131	44 - 644	superfamily	265693

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33072		Not available	178188	68285	439145	Cre12.g521350.t1.2	AT2G17980.1	483391

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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