PHATRDRAFT_43859 (THUMP_THUMPD1_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43859 chr_3 (THUMP_THUMPD1_like) 240370 241353 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0216

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
THUMP_THUMPD1_like THUMP domain-containing protein 1-like; This family contains THUMP domain-only proteins including... cl12076 103.817 6.94E-27 170 - 303 specific 212586
THUMP superfamily THUMP domain, predicted to bind RNA; The THUMP domain is named after THioUridine synthases, RNA... - 103.817 6.94E-27 170 - 303 superfamily 264537

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 197127 299957 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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