PHATRDRAFT_4413 root border cell-specific protein (Pyrid_oxidase_2 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4413	chr_9	root border cell-specific protein (Pyrid_oxidase_2 superfamily)	442429	443319	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0124

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0155	0.23	64 68000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pyrid_oxidase_2 superfamily		Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase.	-	105.383	1.02E-27	17 - 158	superfamily	258150
DUF2470 superfamily		Protein of unknown function (DUF2470); This family is a putative haem-iron utilisation family, as...	-	55.7019	1.22E-10	158 - 256	superfamily	256092
HugZ		Putative heme iron utilization protein [Inorganic ion transport and metabolism]	-	71.6513	2.82E-15	25 - 259	multi-dom	223819

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21282		Not available	269010	296908	453407	Cre02.g098250.t1.2	AT3G03890.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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