PHATRDRAFT_44225 af271290_1 gamma-tubulin (PLN00222)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44225	chr_3	af271290_1 gamma-tubulin (PLN00222)	1356472	1357956	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0371

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0087	0.27	25000 31000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
gamma_tubulin		Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a...	cl10017	814.954	0	3 - 444	specific	100017
Tubulin_FtsZ superfamily		Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well...	-	814.954	0	3 - 444	superfamily	263945
PLN00222		tubulin gamma chain; Provisional	-	907.298	0	1 - 460	multi-dom	215108

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
29237		Not available	193621	296046	75075	Cre06.g299300.t1.2	AT5G05620.1	248690

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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