29237 (TUB4) PLN00222
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
29237 chr_8 (TUB4) PLN00222 1021062 1022692 - PLN00222
NCBI ID Ensembl Genomes exon ID
7452884 Thaps29237.1, Thaps29237.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212
PRK05279
0.9374
TIM_phosphate_binding superfamily
0.9187
hypothetical protein
0.9126
hypothetical protein
0.9109
0.9106
FeThRed_B
0.9102
hypothetical protein
0.9095
DnaJ
0.9071
PHear_NECAP
0.9066
(Tp_bZIP17) regulator [Rayko]
0.9057
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a... cl10017 811.873 0 3 - 463 specific 100017
Tubulin_FtsZ superfamily Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well... - 811.873 0 3 - 463 superfamily 263945
PLN00222 tubulin gamma chain; Provisional - 910.764 0 1 - 479 multi-dom 215108
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44225 PHATRDRAFT_44225 193621 296046 75075 Cre06.g299300.t1.2 AT5G05620.1 248690
KEGG description KEGG Pathway
Not available Not available
GO:0005198 GO:0005874 GO:0007018 GO:0003924 GO:0005525 GO:0043234 GO:0051258 -

structural molecule activity

Details: 
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.
GO Category: 
MF

microtubule

Details: 
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO Category: 
CC

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

protein complex

Details: 
Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or other small molecules.
GO Category: 
CC

protein polymerization

Details: 
The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
GO Category: 
BP
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