PHATRDRAFT_44327 small-conductance mechanosensitive channel (MS_channel superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44327 chr_4 small-conductance mechanosensitive channel (MS_channel superfamily) 248283 249458 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0356

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0008
 0.47

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MS_channel superfamily Mechanosensitive ion channel; Two members of this protein family from M. jannaschii have been... - 95.341 3.23E-23 175 - 381 superfamily 250229
MscS Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] - 94.6021 2.69E-22 130 - 381 multi-dom 223740

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10404 Not available Not available Not available 54411 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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