PHATRDRAFT_44632 (Tho2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44632 chr_4 (Tho2) 1104957 1109279 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0038

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tho2 superfamily Transcription factor/nuclear export subunit protein 2; THO and TREX form a eukaryotic complex which... - 203.335 8.74E-58 902 - 1209 superfamily 256382
Tho2 superfamily Transcription factor/nuclear export subunit protein 2; THO and TREX form a eukaryotic complex which... - 203.335 8.74E-58 902 - 1209 superfamily 256382
Thoc2 superfamily Transcription- and export-related complex subunit; The THO/TREX complex is the transcription- and... - 121.983 3.64E-32 590 - 672 superfamily 256579
Thoc2 superfamily Transcription- and export-related complex subunit; The THO/TREX complex is the transcription- and... - 121.983 3.64E-32 590 - 672 superfamily 256579
PRP38_assoc superfamily Pre-mRNA-splicing factor 38-associated hydrophilic C-term; This domain is a hydrophilic region... - 42.0616 0.000120498 1250 - 1341 superfamily 257364
PRP38_assoc superfamily Pre-mRNA-splicing factor 38-associated hydrophilic C-term; This domain is a hydrophilic region... - 42.0616 0.000120498 1250 - 1341 superfamily 257364

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23279 Not available 231634 291937 Not available Cre12.g507700.t1.1 AT1G24706.1 348397

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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