PHATRDRAFT_45071 dna repair protein rad8 (HELICc)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45071	chr_6	dna repair protein rad8 (HELICc)	113113	115972	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0147	0.26	220 7400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HELICc superfamily		Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast...	-	49.5437	3.50E-07	701 - 831	superfamily	238034
HELICc superfamily		Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast...	-	49.5437	3.50E-07	701 - 831	superfamily	238034
DEXDc		DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA...	cl17251	45.406	7.38E-06	32 - 138	specific	238005
DEXDc superfamily		DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA...	-	45.406	7.38E-06	32 - 138	superfamily	266587

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	33218	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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