PHATRDRAFT_45364 wd-repeat protein (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45364 chr_6 wd-repeat protein (WD40 superfamily) 950997 952441 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0046

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0223
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
B_zip1 basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins; Basic... cl02576 36.1287 0.00209283 17 - 54 specific 213400
B_zip1 superfamily basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins; Basic... - 36.1287 0.00209283 17 - 54 superfamily 261357
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 101.643 1.32E-24 104 - 428 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 74.7399 9.87E-15 98 - 435 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2690 Not available 166212 66979 Not available Not available Not available 326486

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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