PHATRDRAFT_45441 mis3_schpo ribosomal rna assembly protein mis3 (COG1094)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45441	chr_7	mis3_schpo ribosomal rna assembly protein mis3 (COG1094)	164410	165549	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0215	0.22	2500 130000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
KH		K homology RNA-binding domain; K homology RNA-binding domain.	cl17245	38.8156	0.000246293	156 - 209	specific	197652
KH-I superfamily		K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide...	-	38.8156	0.000246293	156 - 209	superfamily	266583
COG1094		Predicted RNA-binding protein (contains KH domains) [General function prediction only]	-	180.179	1.61E-54	54 - 241	multi-dom	224019

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268598		Not available	186837	314684	370297	Cre12.g508200.t1.2	AT5G08420.1	477367

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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