PHATRDRAFT_47107 rhomboid family protein (Rhomboid)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47107	chr_12	rhomboid family protein (Rhomboid)	458505	459533	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0193

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rhomboid		Rhomboid family; This family contains integral membrane proteins that are related to Drosophila...	cl11446	110.776	1.98E-29	120 - 244	specific	250801
Rhomboid superfamily		Rhomboid family; This family contains integral membrane proteins that are related to Drosophila...	-	110.776	1.98E-29	120 - 244	superfamily	264372

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21098		Not available	187547	194424	370483	Cre16.g690900.t1.2	AT1G25290.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments