PHATRDRAFT_47590 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47590	chr_14		185632	188078	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0186

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0094	0.29	0.44 2000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LtrA superfamily		Bacterial low temperature requirement A protein (LtrA); This family consists of several bacteria...	-	46.2977	1.71E-05	256 - 603	superfamily	261054

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4168		Not available	232562	326598	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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