PHATRDRAFT_47704 isoform 2 (Peptidase_C19 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47704 chr_14 isoform 2 (Peptidase_C19 superfamily) 583076 586664 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0426

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 101.198 4.01E-23 560 - 743 superfamily 261337
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 101.198 4.01E-23 560 - 743 superfamily 261337
zf-MYND superfamily MYND finger; MYND finger. - 55.1187 1.96E-09 497 - 534 superfamily 250838
zf-MYND superfamily MYND finger; MYND finger. - 55.1187 1.96E-09 497 - 534 superfamily 250838
DUSP DUSP domain; The DUSP (domain present in ubiquitin-specific protease) domain is found at the N-... cl12116 39.7198 0.000501517 371 - 468 specific 253684
DUSP superfamily DUSP domain; The DUSP (domain present in ubiquitin-specific protease) domain is found at the N-... - 39.7198 0.000501517 371 - 468 superfamily 264555

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22897 Not available 179256 317595 Not available Not available Not available 503684

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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