PHATRDRAFT_47761 glycoprotein 340Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47761	chr_14	glycoprotein 340	755404	759044	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0097

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0086	0.15	2800 37000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Med13_C superfamily		Mediator complex subunit 13 C-terminal; Mediator is a large complex of up to 33 proteins that is...	-	44.6659	0.00010637	236 - 322	superfamily	253682
ClassIIa_HDAC_Gln-rich-N superfamily		Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5...	-	43.5073	0.000181753	106 - 146	superfamily	265191

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24401		Not available	241937	255556	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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