PHATRDRAFT_47986 salt-inducible protein (PPR_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47986 chr_15 salt-inducible protein (PPR_2) 626122 628303 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0216

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 50.0938 7.29E-08 383 - 438 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.6118 0.00281901 470 - 514 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.6118 0.00281901 470 - 514 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.6118 0.00281901 470 - 514 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.6118 0.00281901 470 - 514 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 36.6118 0.00281901 470 - 514 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT5G41170.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments