PHATRDRAFT_48206 exonuclease ib (PIN_EXO1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48206 chr_16 exonuclease ib (PIN_EXO1) 509981 512365 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0142
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIN_EXO1 PIN domain of Exonuclease-1, a structure-specific, divalent-metal-ion dependent, 5'... cl14812 238.55 5.36E-73 1 - 225 specific 189027
PIN_SF superfamily PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a... - 238.55 5.36E-73 1 - 225 superfamily 265458
H3TH_FEN1-like H3TH domains of Flap endonuclease-1 (FEN1)-like structure specific 5' nucleases: FEN1 (... cl14815 73.3366 1.21E-15 261 - 339 specific 188621
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 73.3366 1.21E-15 261 - 339 superfamily 265460

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4742 Not available 261553 110816 Not available Cre07.g353950.t1.1 AT1G18090.1 540882

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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