PHATRDRAFT_4821 histone deacetylase superfamily (HDAC_classIV)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4821	chr_3	histone deacetylase superfamily (HDAC_classIV)	758236	759207	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0074

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0064	0.31	77 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HDAC_classIV		Histone deacetylase class IV also known as histone deacetylase 11; Class IV histone deacetylases (...	cl17011	346.407	6.73E-119	17 - 316	specific	212519
Arginase_HDAC superfamily		Arginase-like and histone-like hydrolases; Arginase-like/histone-like hydrolase superfamily...	-	346.407	6.73E-119	17 - 316	superfamily	266496

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38609		Not available	206810	161898	63461	Cre14.g632300.t1.1	AT5G26040.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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