PHATRDRAFT_48375 guanylate cyclase (CHD)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48375	chr_17	guanylate cyclase (CHD)	268642	272498	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0358

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0020	0.35	0.029 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CHD		cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also...	cl11967	185.475	2.38E-53	539 - 722	specific	143636
Nucleotidyl_cyc_III superfamily		Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group...	-	185.475	2.38E-53	539 - 722	superfamily	264492
CYCc		Adenylyl- / guanylyl cyclase, catalytic domain; Present in two copies in mammalian adenylyl...	-	161.656	9.16E-45	511 - 697	multi-dom	214485
PDEase_I		3'5'-cyclic nucleotide phosphodiesterase; 3'5'-cyclic nucleotide...	-	79.3988	2.43E-16	913 - 1072	multi-dom	109297

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	57891	Cre07.g321150.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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