PHATRDRAFT_48391 jmj4_schpo jumonji domain-containing protein 4 (meiotically up-regulated gene 149 protein) (Cupin_8)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48391	chr_17	jmj4_schpo jumonji domain-containing protein 4 (meiotically up-regulated gene 149 protein) (Cupin_8)	310756	312033	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0148

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0119	0.39	57000 330000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cupin_8		Cupin-like domain; This cupin like domain shares similarity to the JmjC domain.	cl19305	153.275	2.65E-43	61 - 407	specific	257933
Cupin_8 superfamily		Cupin-like domain; This cupin like domain shares similarity to the JmjC domain.	-	153.275	2.65E-43	61 - 407	superfamily	267658

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24345		Not available	234908	63878	Not available	Cre16.g694201.t1.1	Not available	539491

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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