PHATRDRAFT_48763 cyclin h-1 (ccl1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48763	chr_19	cyclin h-1 (ccl1)	184062	185372	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0046

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0048	0.40	610 98000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CYCLIN		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	cl00050	40.6849	7.09E-05	125 - 203	specific	238003
CYCLIN superfamily		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	-	40.6849	7.09E-05	125 - 203	superfamily	260157
ccl1		cyclin ccl1; All proteins in this family for which functions are known are cyclins that are...	-	92.2045	3.20E-21	4 - 300	multi-dom	129660

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21633		Not available	219135	201863	Not available	Cre14.g632783.t1.1	AT5G27620.1	346765

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments