PHATRDRAFT_49014 (PH)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49014	chr_20	(PH)	307663	310695	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0062

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0073	0.29	0.0000007 9600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PH		Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in...	cl17171	49.6612	2.95E-07	717 - 807	specific	241231
PH-like superfamily		Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and...	-	49.6612	2.95E-07	717 - 807	superfamily	266526
PH		Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in...	cl17171	49.6612	2.95E-07	717 - 807	specific	241231
PH-like superfamily		Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and...	-	49.6612	2.95E-07	717 - 807	superfamily	266526

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	243584	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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