PHATRDRAFT_49114 chaperonin containingsubunit 2 (TCP1_beta)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49114	chr_20	chaperonin containingsubunit 2 (TCP1_beta)	624530	626496	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0241

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0126	0.29	160 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TCP1_beta		TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in...	cl02777	866.258	0	8 - 521	specific	239452
chaperonin_like superfamily		chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share...	-	866.258	0	8 - 521	superfamily	261443

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33432		Not available	275260	183871	455478	Cre09.g416750.t1.2	AT5G20890.1	285022

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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