33432 TCP1_beta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33432 chr_4 TCP1_beta 1996611 1998538 - TCP1_beta

Synonyms

NCBI ID Ensembl Genomes exon ID
7451354 Thaps33432.3, Thaps33432.4, Thaps33432.2, Thaps33432.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0274

Most Highly Correlated Transcripts

40200

TRX_reduct
0.8888

267979

HCO3_cotransp superfamily
0.8883

26393

(ubc1) UBCc
0.8844

21706

S1_Rrp4
0.8823

268443

SAICAR_synt_Sc
0.8818

21491

hypothetical protein
0.8809

22276

Gar1
0.8783

268296

(RM12) Ribosomal_L7_L12
0.877

10774

hypothetical protein
0.8757

42652

DRG
0.8712

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in... cl02777 925.579 0 2 - 509 specific 239452
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 925.579 0 2 - 509 superfamily 261443
groEL chaperonin GroEL; Reviewed - 69.3619 6.91E-13 3 - 513 multi-dom 237231

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49114 PHATRDRAFT_49114 275260 183871 455478 Cre09.g416750.t1.2 AT5G20890.1 285022

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

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