PHATRDRAFT_49417 leucine carboxyl (LCM)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49417	chr_22	leucine carboxyl (LCM)	202955	204088	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0378

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0103	0.38	3.8 5600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LCM		Leucine carboxyl methyltransferase; Family of leucine carboxyl methyltransferases EC:2.1.1.-. This...	cl01306	88.4428	5.01E-21	7 - 238	specific	252349
LCM superfamily		Leucine carboxyl methyltransferase; Family of leucine carboxyl methyltransferases EC:2.1.1.-. This...	-	88.4428	5.01E-21	7 - 238	superfamily	260876

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3913		Not available	269772	260960	428651	Cre04.g229350.t1.2	AT1G02100.1	475012

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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