PHATRDRAFT_49451 trna rrna methyltransferase (SpoU)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49451	chr_22	trna rrna methyltransferase (SpoU)	279210	280534	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0380

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0130	0.35	0.0002 2400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SpoU_methylase		SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.	cl17307	116.84	1.72E-31	234 - 379	specific	249983
SpoU_methylase superfamily		SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.	-	116.84	1.72E-31	234 - 379	superfamily	266618
SpoU		rRNA methylases [Translation, ribosomal structure and biogenesis]	-	145.507	1.39E-40	91 - 379	multi-dom	223640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25510		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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