Phatr_hclust_0380 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006879 iron ion homeostasis 0.00246975 1 Phatr_hclust_0380
GO:0006826 iron ion transport 0.00246975 1 Phatr_hclust_0380
GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolism 0.026867 1 Phatr_hclust_0380
GO:0006457 protein folding 0.0320145 1 Phatr_hclust_0380
GO:0000074 regulation of cell cycle 0.080955 1 Phatr_hclust_0380
GO:0006418 tRNA aminoacylation for protein translation 0.121381 1 Phatr_hclust_0380
GO:0006396 RNA processing 0.130144 1 Phatr_hclust_0380
GO:0016567 protein ubiquitination 0.164415 1 Phatr_hclust_0380
GO:0006468 protein amino acid phosphorylation 0.352461 1 Phatr_hclust_0380

Members

PHATRDRAFT_14983 : dead box atp-dependent rna helicase (DEADc)
PHATRDRAFT_16067 : protein kinase domain containing protein (S_TKc)
PHATRDRAFT_16343 : ferritin family protein (Ferritin_like superfamily)
PHATRDRAFT_45586 :
PHATRDRAFT_49451 : trna rrna methyltransferase (SpoU)
PHATRDRAFT_34636 :
PHATRDRAFT_45080 :
PHATRDRAFT_47155 : (PPP4R2 superfamily)
PHATRDRAFT_5532 : n6-dna methyltransferase a (HemK)
PHATRDRAFT_50327 : novel protein (zgc:64188)
PHATRDRAFT_44426 : peptidylprolyl isomerase-like 4 (RRM_PPIL4)
PHATRDRAFT_31939 : cyclin d3
PHATRDRAFT_49486 : smp-30 gluconolaconase lre-like region (SGL)
PHATRDRAFT_42950 :
PHATRDRAFT_21970 : biopterin transport-related protein bt1 (BT1)
PHATRDRAFT_45939 :
PHATRDRAFT_46703 : (Senescence)
PHATRDRAFT_9321 : chaperone protein (DnaJ)
PHATRDRAFT_46236 :
PHATRDRAFT_46044 :
PHATRDRAFT_45192 : adenylate kinase (adk)
PHATRDRAFT_32041 :
PHATRDRAFT_4227 : intracellular chloride channel (ECM4)
PHATRDRAFT_47892 : methyltransferase type 11
PHATRDRAFT_46464 : (RING)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -0.185 0.402591
Copper_SH Copper_SH -0.304 0.00277778
Green_vs_Red_24h Green_vs_Red_24h -0.155 0.166667
Silver_SH Silver_SH 0.087 0.324454
Cadmium_1.2mg Cadmium_1.2mg 0.224 0.00104167
BlueLight_24h BlueLight_24h -0.026 0.934333
GreenLight_0.5h GreenLight_0.5h 1.097 0.000458716
RedLight_6h RedLight_6h 0.164 0.454154
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h -0.024 0.917429
light_6hr light_6hr -1.100 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr -0.921 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h -0.019 0.882066
Ammonia_SH Ammonia_SH -0.187 0.489713
Simazine_SH Simazine_SH 0.188 0.0963576
Oil_SH Oil_SH -0.052 0.592976
Salinity_15ppt_SH Salinity_15ppt_SH -0.388 0.0029703
Cadmium_SH Cadmium_SH 0.293 0.0155172
Blue_vs_Red_24h Blue_vs_Red_24h -0.157 0.26005
highlight_0to6h highlight_0to6h 0.206 0.0804054
BlueLight_0.5h BlueLight_0.5h 0.989 0.0109375
Dispersant_SH Dispersant_SH -0.180 0.0843891
light_16hr_dark_4hr light_16hr_dark_4hr -0.230 0.0528481
light_15.5hr light_15.5hr -0.615 0.00575221
light_10.5hr light_10.5hr -1.101 0.000561798
Dispersed_oil_SH Dispersed_oil_SH -0.194 0.0722944
Si_free Si_free -0.077 0.490408
Re-illuminated_0.5h Re-illuminated_0.5h 1.337 0.000396825
Mixture_SH Mixture_SH -0.342 0.213075
Blue_vs_Red_6h Blue_vs_Red_6h -0.428 0.013
light_16hr_dark_30min light_16hr_dark_30min -0.424 0.0537267
BlueLight_6h BlueLight_6h -0.264 0.0845494
highlight_12to48h highlight_12to48h -0.044 0.827897
RedLight_24h RedLight_24h 0.131 0.402551
Dark_treated Dark_treated 0.594 0.299457
GreenLight_6h GreenLight_6h -0.245 0.136496
Cadmium_0.12mg Cadmium_0.12mg 0.042 0.292818
Blue_vs_Green_24h Blue_vs_Green_24h -0.002 0.979596
RedLight_0.5h RedLight_0.5h 0.916 0.00590551
Green_vs_Red_6h Green_vs_Red_6h -0.409 0.0153061
Re-illuminated_24h Re-illuminated_24h 0.027 0.868899

Motifs

MEME Output