PHATRDRAFT_49632 loc507659 protein (UEV superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49632	chr_23	loc507659 protein (UEV superfamily)	260640	261902	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0367

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0112	0.35	180 1300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UEV superfamily		UEV domain; This family includes the eukaryotic tumor susceptibility gene 101 protein (TSG101)....	-	104.255	3.63E-27	52 - 145	superfamily	203324
Vps23_core superfamily		Vps23 core domain; ESCRT complexes form the main machinery driving protein sorting from endosomes...	-	64.5744	3.01E-13	342 - 406	superfamily	117992

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23630		Not available	190254	218010	Not available	Not available	AT3G12400.1	352404

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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