23630 UEV superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23630 chr_7 UEV superfamily 1855448 1857431 - UEV superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447204 Thaps23630.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0418

Most Highly Correlated Transcripts

270222

0.9334

bd1840

(bd1840) NA
0.9246

bd933

(bd933) NA
0.9013

bd737

(bd737) NA
0.8919

8849

U-box superfamily
0.8865

bd1851

(bd1851) NA
0.8775

24658

DUF605
0.8771

bd877

(bd877) NA
0.8768

bd1756

(bd1756) NA
0.8763

22155

hypothetical protein
0.8759

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UEV superfamily UEV domain; This family includes the eukaryotic tumor susceptibility gene 101 protein (TSG101).... - 102.714 1.92E-26 40 - 148 superfamily 203324
Vps23_core superfamily Vps23 core domain; ESCRT complexes form the main machinery driving protein sorting from endosomes... - 75.36 4.17E-17 358 - 422 superfamily 117992
Vps23_core superfamily Vps23 core domain; ESCRT complexes form the main machinery driving protein sorting from endosomes... - 75.36 4.17E-17 358 - 422 superfamily 117992

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49632 PHATRDRAFT_49632 190254 218010 Not available Cre07.g351050.t1.2 AT3G12400.1 352404

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

GO:0004840 GO:0006464 GO:0006512 GO:0015031 -

GO:0004840

NA

Details: 
NA
GO Category: 
NA

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0006512

NA

Details: 
NA
GO Category: 
NA

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

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