PHATRDRAFT_50132 (MIF4G)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50132 chr_27 (MIF4G) 144609 149180 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0039

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0090
 0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MIF4G Middle domain of eukaryotic initiation factor 4G (eIF4G); Also occurs in NMD2p and CBP80. The... cl02652 92.0383 1.56E-20 639 - 816 specific 214713
MIF4G superfamily MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... - 57.7215 2.48E-09 845 - 968 superfamily 261392
Upf2 superfamily Up-frameshift suppressor 2; Transcripts harbouring premature signals for translation termination... - 60.4857 2.35E-10 1200 - 1378 superfamily 252337
MIF4G superfamily MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... - 57.7215 2.48E-09 845 - 968 superfamily 261392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262352 Not available 273958 192605 444992 Cre17.g729250.t1.1 AT2G39260.1 547735

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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