262352 MIF4G
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262352 chr_4 MIF4G 2342289 2346519 - MIF4G

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0414

Most Highly Correlated Transcripts

5001

SNF2_N
0.9296

23582

hypothetical protein
0.9292

20675

WD40 superfamily
0.9289

24604

hypothetical protein
0.9183

25270

hypothetical protein
0.9157

9790

hypothetical protein
0.9137

1216

hypothetical protein
0.9109

21997

TPR_12
0.9091

23979

zf-HC5HC2H superfamily
0.902

25603

hypothetical protein
0.9008

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MIF4G Middle domain of eukaryotic initiation factor 4G (eIF4G); Also occurs in NMD2p and CBP80. The... cl02652 79.7119 1.44E-16 441 - 616 specific 214713
MIF4G superfamily MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... - 66.1959 3.08E-12 632 - 834 superfamily 261392
MIF4G MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... cl02652 66.1959 3.08E-12 632 - 834 specific 251572
MIF4G superfamily MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... - 66.1959 3.08E-12 632 - 834 superfamily 261392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50132 PHATRDRAFT_50132 273958 192605 444992 Cre17.g729250.t1.1 AT2G39260.1 547735

KEGG

KEGG description KEGG Pathway
mRNA surveillance pathway map03015

GO Terms

GO:0003723 -

GO:0003723

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

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