PHATRDRAFT_50135 rio kinase 1 (RIO1_euk)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50135	chr_27	rio kinase 1 (RIO1_euk)	155336	157292	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0226	0.15	45 9200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RIO1_euk		RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is...	cl17248	375.081	5.21E-127	145 - 361	specific	240170
RIO superfamily		RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger...	-	375.081	5.21E-127	145 - 361	superfamily	266585
RIO1		Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms /...	-	290.375	4.25E-93	100 - 382	multi-dom	224632

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31710		Not available	273960	192692	64080	Cre13.g580900.t1.1	AT5G37350.1	298604

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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