PHATRDRAFT_50220 serine threonine protein kinase (Ubox)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50220	chr_28	serine threonine protein kinase (Ubox)	27680	29410	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0378

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0183	0.27	2.9 4.4

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ubox		Modified RING finger domain; Modified RING finger domain, without the full complement of Zn2+-...	cl17544	80.3569	1.75E-18	492 - 550	specific	128780
U-box superfamily		U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding...	-	80.3569	1.75E-18	492 - 550	superfamily	266741
C2 superfamily		C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-...	-	52.7244	1.99E-08	73 - 152	superfamily	265430

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24305		Not available	Not available	320337	254497	Cre17.g743847.t1.1	AT3G61390.2	494414

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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