PHATRDRAFT_50318 myb4r1 (myb domain protein 4r1) transcription factor
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50318 chr_28 myb4r1 (myb domain protein 4r1) transcription factor 285016 286300 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0492

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... cl17250 40.2514 7.39E-05 317 - 364 specific 238096
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 38.844 0.000205936 258 - 326 superfamily 266586
Myb_DNA-bind_6 Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as... cl17250 43.0812 8.37E-06 200 - 266 specific 258184
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 38.844 0.000205936 258 - 326 superfamily 266586
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 38.844 0.000205936 258 - 326 superfamily 266586

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261894 Not available 152939 238718 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments