PHATRDRAFT_50498 (C2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50498 chr_30 (C2) 224026 226074 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0061
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
C2 C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... cl14603 39.7427 0.000328758 400 - 491 specific 175973
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 39.7427 0.000328758 400 - 491 superfamily 265430
C2 C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... cl14603 39.7427 0.000328758 400 - 491 specific 175973
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 39.7427 0.000328758 400 - 491 superfamily 265430
C2 C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... cl14603 39.7427 0.000328758 400 - 491 specific 175973
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 39.7427 0.000328758 400 - 491 superfamily 265430

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 285421 Not available Not available AT1G05500.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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