PHATRDRAFT_50630 ccaat enhancer binding protein zeta isoform 2 (COG5593)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50630	chr_33	ccaat enhancer binding protein zeta isoform 2 (COG5593)	18968	21883	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0255	0.14	750 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CBF superfamily		CBF/Mak21 family; CBF/Mak21 family.	-	102.694	6.78E-25	473 - 627	superfamily	252241
CBF superfamily		CBF/Mak21 family; CBF/Mak21 family.	-	102.694	6.78E-25	473 - 627	superfamily	252241
RNA_pol_3_Rpc31 superfamily		DNA-directed RNA polymerase III subunit Rpc31; RNA polymerase III contains seventeen subunits in...	-	37.8322	0.0079662	705 - 802	superfamily	256559
COG5593		Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal...	-	218.757	7.36E-60	76 - 868	multi-dom	227880

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20985		Not available	224260	320606	451177	Cre10.g459600.t1.1	AT1G72440.1	351404

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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