PHATRDRAFT_50796 cg5605-isoform a (eRF1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50796 chr_4 cg5605-isoform a (eRF1) 461173 462636 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0214
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
eRF1_2 superfamily eRF1 domain 2; The release factor eRF1 terminates protein biosynthesis by recognizing stop codons... - 165.155 6.17E-49 146 - 278 superfamily 251975
eRF1_2 superfamily eRF1 domain 2; The release factor eRF1 terminates protein biosynthesis by recognizing stop codons... - 165.155 6.17E-49 146 - 278 superfamily 251975
eRF1_1 superfamily eRF1 domain 1; The release factor eRF1 terminates protein biosynthesis by recognizing stop codons... - 150.055 2.85E-43 8 - 140 superfamily 251974
eRF1_1 superfamily eRF1 domain 1; The release factor eRF1 terminates protein biosynthesis by recognizing stop codons... - 150.055 2.85E-43 8 - 140 superfamily 251974
eRF1_3 superfamily eRF1 domain 3; The release factor eRF1 terminates protein biosynthesis by recognizing stop codons... - 111.104 1.08E-29 281 - 418 superfamily 251976
eRF1_3 superfamily eRF1 domain 3; The release factor eRF1 terminates protein biosynthesis by recognizing stop codons... - 111.104 1.08E-29 281 - 418 superfamily 251976
eRF1 Peptide chain release factor 1 (eRF1) [Translation, ribosomal structure and biogenesis] - 453.361 1.23E-156 11 - 420 multi-dom 224420

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22240 Not available 192091 245855 420966 Cre13.g587050.t1.2 AT3G26618.1 547793

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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