PHATRDRAFT_51174 atp-bindingsub-family fmember 1 (Uup)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51174 chr_20 atp-bindingsub-family fmember 1 (Uup) 87662 89697 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0396

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0065
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 159.151 8.47E-46 373 - 566 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 159.151 8.47E-46 373 - 566 superfamily 266551
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 159.151 8.47E-46 373 - 566 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 159.151 8.47E-46 373 - 566 superfamily 266551
ABC_tran_2 superfamily ABC transporter; This domain is related to pfam00005. - 34.8604 0.00832503 281 - 315 superfamily 257346
Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction... - 486.372 2.18E-165 68 - 581 multi-dom 223562

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36334 Not available 192795 289212 451786 Cre01.g034950.t1.2 AT3G54540.1 555261

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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