PHATRDRAFT_51245 propionyl-alpha subunit (COG4770)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51245 chr_26 propionyl-alpha subunit (COG4770) 126701 128992 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0018
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-... cl11404 94.0199 4.25E-23 572 - 636 specific 133459
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 94.0199 4.25E-23 572 - 636 superfamily 264355
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 211.006 1.98E-63 115 - 327 superfamily 266590
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 151.867 1.55E-43 5 - 108 superfamily 249744
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 151.867 1.55E-43 5 - 108 superfamily 249744
Biotin_carb_C Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... cl08365 142.167 4.46E-40 345 - 456 specific 214878
Biotin_carb_C superfamily Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... - 142.167 4.46E-40 345 - 456 superfamily 263607
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] - 652.435 0 1 - 638 multi-dom 227111

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263480 Not available 136622 209152 Not available Not available Not available 352373

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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