PHATRDRAFT_54072 uvh6 (ultraviolet hypersensitive 6) atp binding atp-dependent dna helicase atp-dependent helicase dna binding acting on acidin phosphorus-containing anhydrides nucleic acid binding (rad3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54072 chr_2 uvh6 (ultraviolet hypersensitive 6) atp binding atp-dependent dna helicase atp-dependent helicase... 24858 28791 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0049

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc2 DEAD-like helicases superfamily; DEAD-like helicases superfamily. cl17251 286.967 4.78E-90 8 - 297 specific 214693
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 286.967 4.78E-90 8 - 297 superfamily 266587
DUF1227 superfamily Protein of unknown function (DUF1227); This family represents a conserved region within a number of... - 181.677 2.04E-53 285 - 437 superfamily 191608
DUF1227 superfamily Protein of unknown function (DUF1227); This family represents a conserved region within a number of... - 181.677 2.04E-53 285 - 437 superfamily 191608
HELICc2 helicase superfamily c-terminal domain; helicase superfamily c-terminal domain. cl17460 175.93 1.97E-51 569 - 713 specific 214694
Helicase_C_2 superfamily Helicase C-terminal domain; This domain is the second of two tandem AAA domains found in a wide... - 175.93 1.97E-51 569 - 713 superfamily 266701
rad3 DNA repair helicase (rad3); All proteins in this family for which funcitons are known are DNA-DNA... - 751.935 0 7 - 742 multi-dom 233047

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268868 Not available 201859 210123 63180 Cre17.g706300.t1.1 AT1G03190.2 354695

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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