PHATRDRAFT_54478 malate synthase (malate_synt_A)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54478	chr_8	malate synthase (malate_synt_A)	403548	405209	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0048

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0043	0.34	0.000000024 16000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
malate_synt_A		Malate synthase A (MSA), present in some bacteria, plants and fungi. Prokaryotic MSAs tend to be...	cl17217	801.854	0	25 - 541	specific	238369
malate_synt superfamily		Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA ,...	-	801.854	0	25 - 541	superfamily	266562

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26293		Not available	Not available	Not available	Not available	Cre03.g144807.t1.1	AT5G03860.2	552008

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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