PHATRDRAFT_55141 exosome complex exonuclease rrp42 (ribosomal rna processing protein 42 (RNase_PH superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_55141	chr_27	exosome complex exonuclease rrp42 (ribosomal rna processing protein 42 (RNase_PH superfamily)	32818	33882	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0047	0.27	76 440

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNase_PH superfamily		RNase PH-like 3'-5' exoribonucleases; RNase PH-like 3'-5'...	-	153.52	1.06E-43	7 - 312	superfamily	261591
COG2123		RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis]	-	93.5817	2.35E-22	1 - 328	multi-dom	225034

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23018		Not available	199512	25945	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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