PHATRDRAFT_8113 blue light receptor (PAS_9)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_8113	chr_20	blue light receptor (PAS_9)	631571	631879	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0062

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0073	0.29	0.0000007 9600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PAS superfamily		PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising...	-	52.2503	2.83E-10	1 - 98	superfamily	238075
PAS superfamily		PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising...	-	52.2503	2.83E-10	1 - 98	superfamily	238075
PAS_9		PAS domain; PAS domain.	-	93.6019	7.87E-26	1 - 98	multi-dom	257751

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33340		Not available	260397	172818	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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